Health

SIR SEIR Compartmental Epidemic R0 and Intervention Modeling Coach

Run SIR / SEIR / SEIR+V / SEIR+H ODEs with RK4: R0, herd-immunity threshold, analytic peak and final-size equations, growth-rate conversion, WAIFW next-generation-matrix R0, incidence fitting and intervention simulation.

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Quick start

Call this tool from your code in three languages.

cURL

curl -X POST 'http://127.0.0.1:3003/en/api/tools/sir-seir-compartmental-epidemic-r0-and-intervention-modeling-coach' \
  -H 'Content-Type: application/json' \
  -d '{"model":"SEIR","population":1000000,"r0":2.5,"infectiousDays":5,"latentDays":3,"initialInfectious":10,"days":180,"interventionDay":40,"interventionBetaReduction":40,"vaccinationDay":0,"vaccinationRate":0,"hospProp":0,"hospLosDays":10,"waifw":"","fitData":""}'

API reference

Send a POST request with your inputs as JSON. File parameters require a separate upload first.

Endpoint

HTTP

POST http://127.0.0.1:3003/en/api/tools/sir-seir-compartmental-epidemic-r0-and-intervention-modeling-coach

Parameters

Name	Type	Required	Description
model	select	No	—
population	number	No	—
r0	number	No	—
infectiousDays	number	No	—
latentDays	number	No	—
initialInfectious

MCP integration

Add this tool to your Model Context Protocol server so AI agents can list and call it.

Server configuration

Add this block to your MCP client configuration:

mcp.json

{
  "mcpServers": {
    "elysiatools-sir-seir-compartmental-epidemic-r0-and-intervention-modeling-coach": {
      "name": "sir-seir-compartmental-epidemic-r0-and-intervention-modeling-coach",
      "description": "Run SIR / SEIR / SEIR+V / SEIR+H ODEs with RK4: R0, herd-immunity threshold, analytic peak and final-size equations, growth-rate conversion, WAIFW next-generation-matrix R0, incidence fitting and intervention simulation.",
      "baseUrl": "http://127.0.0.1:3003/mcp/sse?toolId=sir-seir-compartmental-epidemic-r0-and-intervention-modeling-coach",
      "command": "",
      "args": [],
      "env": {},
      "isActive": true,
      "type": "sse"
    }
  }
}

List available tools

After connecting to the SSE endpoint, list the exposed tools:

tools/list

{
  "jsonrpc": "2.0",
  "id": 1,
  "method": "tools/list"
}

Call this tool

Invoke the tool by its id, passing arguments built from its parameters:

tools/call

{
  "jsonrpc": "2.0",
  "id": 2,
  "method": "tools/call",
  "params": {
    "name": "sir-seir-compartmental-epidemic-r0-and-intervention-modeling-coach",
    "arguments": {
  "model": "SEIR",
  "population": 1000000,
  "r0": 2.5,
  "infectiousDays": 5,
  "latentDays": 3,
  "initialInfectious": 10,
  "days": 180,
  "interventionDay": 40,
  "interventionBetaReduction": 40,
  "vaccinationDay": 0,
  "vaccinationRate": 0,
  "hospProp": 0,
  "hospLosDays": 10,
  "waifw": "",
  "fitData": ""
}
  }
}

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